Contents:
PAM_finder()
RF_score()
clinvar_VCF_translator()
df_formatter()
eligible_PAM_finder()
genome_loader()
goldengate_oligos()
input_formatter()
make_aligner()
mut_formatter()
mutation
ontarget_score()
other_filtration()
pegRNA_generator()
peggscore2()
prime_oligo_generator()
primedesign_formatter()
run()
sensor_generator()
sensor_viz()
split_word()
base_oligo_generator()
eligible_PAM_finder_base()
gRNA_generator()
run_base()
sensor_generator_base()
sensor_viz_base()
aavs1_muts()
library_maker()
mutation_aggregator()
neutral_substitutions()
nontargeting_guides()
safe_muts()
A jupyter notebook version of the PEGG tutorial can be accessed at the following link:
Jupyter Notebook Tutorial